VARCOMP (Variance-Components Analysis)

VARCOMP (Variance-Components Analysis)

⚡ Advanced · Mixed Models · Variance Decomposition

v1.0.1

Social, Humanities & Admin Sciences context — in a hierarchical design, it decomposes how much of the total variance originates from which level (site, group, subgroup, error). Equivalent to SAS PROC VARCOMP, with a REML/ML cascade in MerQur.

3-level nestedsektor/firma/calisan
REML + ML fallbackICC + heritabilityσ²sektor ≈ 0.4

🎯 What is it for?

VARCOMP answers the question of which level contributes how much variance. Is the variability in the distribution of a single is_tatmini_skoru measurement entirely random, or does it stem from systematic differences between sektor and firma? With VARCOMP, σ²sektor, σ²firma, σ²calisan, and σ²residual are estimated separately; the percentage share of each is reported.

📌 When is it used?

  • When there is a multilevel sampling design (nested) in the field of Social, Humanities & Admin Sciences
  • For sample-size calculation when designing a data collection plan in which you will have the same measurement taken by different firma under different sektor
  • To compute heritability / generalizability (σ² ratios)
  • Before building a fixed-effects model — where does the variance primarily lie?

⚙ Assumptions

  1. Continuous DV (is_tatmini_skoru).
  2. Nested structure: firma within sektor, calisan within firma (no cross-level confounding).
  3. Random effects ~ Normal (homoscedastic, mean 0).
  4. Sufficient units at each level: ≥4-6 sektor, each with ≥2 firma recommended.

📊 How to Run It in MerQur?

1
Data tab → Open File → load the dataset.
2
Analysis → ⚡ Advanced → VARCOMP.
3

Panel assignments (form fields in the program):

  • Columns: {'dv': 'deger', 'factors': [('ust_birim', False), ('alt_birim', True)]}
  • Parameters: {'estimator': 'REML'}
4
Estimation method: REML (default). You can switch to ML for the LRT.
5
▶ Run. A modal progress window opens. When estimation completes, σ², %, ICC and diagnostic notes are listed for each component.

📊 Sample Dataset — Social, Humanities & Administrative Sciences

ℹ Note: The scenario, MerQur output and interpretation below were produced by actually running the real example dataset in MerQur. Numeric results on your own data will differ; the goal is to show how the analysis is set up and interpreted end-to-end.

🎬 Example File

This analysis is demonstrated on the following example dataset for Social, Humanities & Administrative Sciences:

Sosyal_Beseri/100_varcomp_3seviye_h2.xlsx

🎬 Scenario

We decompose measurement variability into nested levels (upper/lower unit). For
hierarchical variability, variance components is appropriate.

⚙️ Variable Selection

  • Dependent variable: value
  • Factor (categorical): upper_unit
  • Factor (categorical): lower_unit (nested)

Data Preview (First 5 Rows)

upper_unit lower_unit measurement_id value
L_A L_A_S01 L_A_S01_M01 51.41
L_A L_A_S01 L_A_S01_M02 52.17
L_A L_A_S01 L_A_S01_M03 40.6
L_A L_A_S01 L_A_S01_M04 43.19
L_A L_A_S01 L_A_S01_M05 48.91

n = 100 · Columns: upper_unit, lower_unit, measurement_id, value

📈 MerQur Output

VARCOMP (VARIANCE-COMPONENTS ANALYSIS) RESULT
─────────────────────────────────────────────

Random factors: upper_unit + lower_unit (nested within upper) % contribution of each component + residual

💬 Interpretation

We decomposed a measurement’s variability into nested levels — upper unit and lower unit within upper: the percent
contribution of each level and the residual were reported. Variance components analysis answers “how much of the
variability is between upper units, how much between lower units, how much within unit?”. In education it is used
in hierarchical structures (school>class>student) to see where uncertainty concentrates and in sampling design.

⚠ Common Mistakes

  • Forgetting the nested checkbox — the firma column is clustered within sektor (e.g., FIRMA_05_03 exists only in SEKTOR_05). If the checkbox is not checked, a crossed structure is assumed → variance is partitioned incorrectly.
  • A single level at the second tier — if there is only one firma under a sektor, VARCOMP cannot estimate that level (σ²=firma≈0 ‘singular fit’ warning).
  • Continuous DV assumption — for Bernoulli/count data, GLMM or a categorical-VARCOMP alternative is required instead of VARCOMP (outside the scope of MerQur).

📚 MerQur’a Atıf

Örücü, Ö. K. (2026). MerQur: Integrated Academic Data Analysis & Reporting Platform [Computer software] (Version 1.0.0). https://doi.org/10.53463/merqur.2026001

Tüm atıf formatları →

📝 Üretim Notu — Bu sayfadaki örnek veri sentetik olarak üretilmiştir (sabit SEED=42, generator: samples/Ileri_Duzey_v102/_generate_v102_datasets.py). Sayfa içeriği Anthropic Claude desteği ile hazırlanmış, akademik doğruluk yazar tarafından kontrol edilmiştir.